source: trunk/go @ 250

;
; Directories you'll need:
;


RootIDL = ":/users/ucsd/ux454321/Microscope/trunk"
;RootIDL = ":/home/dcollins/Microscope/trunk"
print, "Root ", RootIDL
!path = !path + RootIDL+"/Code"
!path = !path + RootIDL+"/Code_Xtras"
!path = !path + RootIDL+"/Tools"
!path = !path + RootIDL+"/XtraTools"
!path = !path + RootIDL+"/autoMeta"
!path = !path + RootIDL+"/kitp_anal"
!path = !path + RootIDL+"/AakeKITP"

;!path = !path + ":/gpfs-wan/projects/cadac/software/contrib/aake/idl"
;!path = !path + ":/gpfs-wan/projects/cadac/software/contrib/aake/codes/KITPcompare07/idl"

wan = "/gpfs-wan/projects/lca/dcollins/"
scratch = "/gpfs/ux454321"

;
; non-object routines that are useful.
;

.r minc
.r zeropad
.r stat
.r tv1
.r st2
.r center
;this is a flag for when I, like an idiot, try to run my code like a script,
;instead of compiling.  
AtTheMainLine = 1


;necessary for properly reading in files.
.r h5listfields  ;lists fields in dataset (to check for existance)
.r fields        ;maps integer m to desired field.
.r gs2           ;reads the data from the hdf5 file.
.r gs0           ;calls getdata (reads data from file) (kind of redundant...)
.r gs1           ;gets derived data (reads from file w/ gs0, manipulates)
.r gs            ;switches between gs0,gs1 (straight from file or derived.)
.r read_aake     ;IO for KITP comparison.
;manipulation, plotting
.r read_hierarchy_wrapper
.r convert       ;manipulates selection indicies.
.r OpenPlotFile  ;opens plot files.
.r ClosePlotFile ;Closes plot files.
.r grab          ;takes slices, subsets of full cube, sets grid members.
.r grab2         ;calls grab, returns the slice as a function.
.r p2            ;calls grab, makes plot.
.r advance       ;advances timestep & slice position.
.r gsh           ;Assembles the hierarchy slice.
.r extract       ;From slices, assembles the whole hierarchy.  (May be the slow way to do things...)

;various plot routines
.r p2_boundarylines
.r p2_range
.r p2_user
.r p2_context
.r p2_color
.r p2_grids

;Other methods
.r read_default_file
.r write_default_file

;gui and widgets.
.r gui

;the object
.r slide__define
.r return_file_loc
.r return_pos_in_volume

;auto meta data
.r auto_meta
.r make_html.pro 
.r pre_fill_structures.pro      

;
; Startup stuff
;
;


bface = [54,55,56,62,63,64,70,71,72,79,79,80,86,87,88,94,95,96]

iso_face = [49, 51, 52, 53, 54, 55, 56, $
        57, 59, 60, 61, 62, 63, 64, $
        65, 67 ,68 ,69, 70, 71, 72, $
        73, 75, 76, 77, 78, 79, 80, $
        81, 83, 84, 85, 86, 87, 88, $
        89, 91, 92, 93, 94, 95, 96]
iso=[0,2,3,4,5,6,7]
iso_all = [iso, iso_face]
x_face = [49, 51, 52, 53, 54, 55, 56, $
        57, 59, 60, 61, 62, 63, 64]
y_face = [65, 67 ,68 ,69, 70, 71, 72, $
        73, 75, 76, 77, 78, 79, 80]
z_face = [81, 83, 84, 85, 86, 87, 88, $
        89, 91, 92, 93, 94, 95, 96]
all_face = [49, 50, 51, 52, 53, 54, 55, 56, $
        57, 58, 59, 60, 61, 62, 63, 64, $
        65, 66 ,67 ,68 ,69, 70, 71, 72, $
        73, 74, 75, 76, 77, 78, 79, 80, $
        81, 82, 83, 84, 85, 86, 87, 88, $
        89, 90, 91, 92, 93, 94, 95, 96]